Browse of TCMCG057C03531 protein

CDS

Accession Number	TCMCG057C03531
gbkey	CDS
Protein Id	XP_018486048.1
Location	join(22949755..22949848,22949941..22950503,22950857..22950928,22951007..22951084,22951158..22952229,22952422..22952552,22952727..22952945,22953017..22953589,22953671..22953880,22953954..22954058)
Gene	LOC108856676
GeneID	108856676
Organism	Raphanus sativus

Protein

Length	1038aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018630546.1
Definition	PREDICTED: helicase-like transcription factor CHR28 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	KL
Description	SNF2 domain-containing protein helicase domain-containing protein
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15173        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04918        [VIEW IN KEGG] map04918        [VIEW IN KEGG]
GOs	GO:0000724        [VIEW IN EMBL-EBI] GO:0000725        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006304        [VIEW IN EMBL-EBI] GO:0006305        [VIEW IN EMBL-EBI] GO:0006306        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009292        [VIEW IN EMBL-EBI] GO:0009294        [VIEW IN EMBL-EBI] GO:0009892        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010468        [VIEW IN EMBL-EBI] GO:0010605        [VIEW IN EMBL-EBI] GO:0010629        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016458        [VIEW IN EMBL-EBI] GO:0019222        [VIEW IN EMBL-EBI] GO:0031047        [VIEW IN EMBL-EBI] GO:0032259        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0043414        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044728        [VIEW IN EMBL-EBI] GO:0044764        [VIEW IN EMBL-EBI] GO:0045003        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048519        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0060255        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0080188        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGATTCCGCTATTGAAATCAGTTCAGACAGTGACGTTGAGATACAAGAAACAAGAACCACTCTTCCTCCTCCACATCCACTGTTACCTCAAGGGTCTACGCTGAGACCTCACCTTTCTATTGGGTCCTCTTCCAATGCAAATGGCCTCACTAGAGTTGGACTACTTCCACTACCCTCTTCATCACGCAATGCCTTTGAAGCCAAGCCTGTACTCTCTTCACGCAATGCCTTTGAAGCCAAGCCACTGACTAATGGGCACCACATAGGATCTCAACAAGCTCTAACGAGGGTGCTTCCTCCATCTCTTACTCGCCCTCCTATGCCGTTGAGACCTGGTATTCGCCCTCCTATCCCGTTCCTTACGAGTAATGGGAACGGGAGTCACTTTCGTGGGGTTTATCCTCCTGCTGGTACTCTAGCTGCGTCAGGTTCAGGCATCAACGGTAACTTTGGAGGTGGTTATGGTGGATTCCATGATGGGATAGGCACGGGGCGTGTCGTTAATGGCGATCGCTTGTTTCCTCCGTCGTCTGCAACAGCTGCTTCTACCTCGCATTTCAATGGTGGTGGTGGTGATCCGTTGCATAGGAATGGCATGGGTGAGGATAGGAGTTCGGAGACCGACGAGACGCTCGTCTATCAGGCTGTTCTACAGAATCTGAATCAACCCAAGTCCGAGGTCGATTTACCAGACGGTCTTCTTGCAGTTCCTCTTATGAAGCATCAGAAAATTGCATTGGCATGGATGTTTCAGAAGGAAACCAGAAGTGCGCCCTGTCTGGGAGGGATATTAGCTGATGATCAGGGCCTTGGTAAAACAATCTCAACAATTGCTCTTATCCTAAAACAAATGCACGAGGCAAAATCAAAGTCTGAGAATTCAAGCAACCAAGTGGCTGAAGCATTGGATCTGGATGCTGATGATGAATCAGAGAATGCATTTGTGAAACAAGAGTCGAAGGCTATAAGTGTAAATGGCATGTCAAGCAACCAAGTGGCTGAAGCATTGGATCTGGATGCTGACGGTGAATCAGAGAATGCATTCGTGAAACAAGAGTCAAAGGCAATAAGTGTTAATGGCAGTTATGGCAGGAAGAGAGGAAAGAATGAAGAAGAAGCCAGTACTTCAACAAGGAAATTTAAAGGGAAAAGACCAGCTGCTGGCACTTTGATTGTTTGTCCAGCTAGTGTCGTGCGGCAGTGGGCAAGAGAACTTGATGAGAAGGTTACTGAAGAAGCCAAGCTTTCTGTTCTAATCTACCACGGTGGTAACAGGACTAAGGATCCTACTGAACTAGCAAAATATGATGTGGTGATGACAACGTACGCTATCGTCTCAAATGAAGTTCCGAAGGTAACCTTGGAGGACGACGATGAGAATGATAAGAAAACCTTGGAGGATGGCGATGAGAATGATGAGAAATATGCCGAGAGAAATGGTCTCGCCTCTGGCTTCGTCTTGAGTAAGAAACGCAAAAGTATGTTGGGTGGCAAAAGTATGTTGGGTGCTCCTAAGAAGAGTAAGAAACGAGGCAAGAAAAACGCTGACGATTCTGACCCTAACTGTGGTACTCTGGCAAAGGTTGGCTGGTTCAGAGTTGTGCTTGACGAAGCTCAGACGATTAAGAATCACAAGACCCAGGTGGCAAGAGCCTGTTGTGGTCTTCGAGCCAAAAGGAGATGGTGTTTGTCTGGAACACCGATTCAAAACACGATAGATGATTTGTTCAGCTATTTCAGGTTTCTAAGGTATGATCCGTATGCCGTGTACAAGTCGTTCTACAACACAATTAAGCTTCCAATTTCCAGAAATTCCCCAAATGGTTACAAGAAGCTTCAAGCTATTCTAAAGGCTATAATGCTGCGCCGTACCAAAGGAACATTGCTTGATGGTAAGCCTATAATTAATCTACCACCGAAGACAATTAATTTGAGCAAGGTAGACTTTTCGGTAGAAGAGCGGTCTTTCTACACGAAGCTTGAAGCCGATTCACGTTCTCAGTTCAAGGCATATTATGATGCAGGAACTTTGAATCAAAACTATGCAAGCATTCTTCTCATGCTTCTACGGCTACGCCAAGCCTGTGACCATCCCCAACTTACTAAAGGATTCAAATCAAATTCTGTTGGGAAGGAATCAGAAGGAGCTGCTAAAAGACTTTCTAGGGAGGTTCGAGTTAGCTTGCTCAATCGCTTAGAATCGTCTCCCATCTGCCGTGCCTGCAACGATCCACCAGAAGTTCCTGTTATTACTTTGTGTGGACATATATTCTGCTATCAGTGTGTATCAGAATACATCACAGGGGATGAGAACTCGTGCCCTGTGTGCAGAGAACAGCTTGCGCATGATGCTGTTTTCTCCCAGTCTACCCTTCGAAGTTGTATGGCTGCTGAAACGGGGTGTAGTTCCTCCTCACTTGCTAAAGGTCTTAACAAAGCAGCTTTTCAGAATTTCGACTACAGCTCATCGAAAATCAAAACTGTCTTAGATATTCTGCAGTCGCTTTCTAACCAAGGCAGTCAAAATTCAACTCGGAACGGTGGAATGCCTTCTTCCTCGCAACCATATGACGTCGACGACGACGATGATGTTACCATTATAGAAGAGCAAACGAGTGTGCCATCGAATCCTCACAACCAAGAGCCAGTAAAAACGATTATCTTCTCTCAGTGGACTAGTATGCTTGACGTGCTCGAGCTCTCTCTAAATGAAAGAACTATAGAGTTTAGAAGGTTAGACGGTACAATGAGTCTAGCTGCTAGAGACAGAGCTATCAAAGAATTCAGCAACGATCCAGATGTAAAAGTGATGATAATGTCTTTGAAAGCTGGAAACCTTGGGCTGAATATGGTTGCTGCAAGTCATGTCATTCTTCTTGATCTTTGGTGGAATCCAACTACTGAAGACCAAGCTATTGATCGAGCGCATCGCATTGGACAAACTCGACCAGTTACTGTTACTCGTATTACCATAACCAATACGGTGGAAGATAGAATTTTGGCTCTCCAGGAAGAGAAAAGGGCAATGGTTGCGTCTGCCTTTGGTGAAGAATATGGTGGAAGCTCTGCAACTCGACTAACAGTAGATGATCTCAAATATCTATTCATGGCGTAG

Protein:   MDSAIEISSDSDVEIQETRTTLPPPHPLLPQGSTLRPHLSIGSSSNANGLTRVGLLPLPSSSRNAFEAKPVLSSRNAFEAKPLTNGHHIGSQQALTRVLPPSLTRPPMPLRPGIRPPIPFLTSNGNGSHFRGVYPPAGTLAASGSGINGNFGGGYGGFHDGIGTGRVVNGDRLFPPSSATAASTSHFNGGGGDPLHRNGMGEDRSSETDETLVYQAVLQNLNQPKSEVDLPDGLLAVPLMKHQKIALAWMFQKETRSAPCLGGILADDQGLGKTISTIALILKQMHEAKSKSENSSNQVAEALDLDADDESENAFVKQESKAISVNGMSSNQVAEALDLDADGESENAFVKQESKAISVNGSYGRKRGKNEEEASTSTRKFKGKRPAAGTLIVCPASVVRQWARELDEKVTEEAKLSVLIYHGGNRTKDPTELAKYDVVMTTYAIVSNEVPKVTLEDDDENDKKTLEDGDENDEKYAERNGLASGFVLSKKRKSMLGGKSMLGAPKKSKKRGKKNADDSDPNCGTLAKVGWFRVVLDEAQTIKNHKTQVARACCGLRAKRRWCLSGTPIQNTIDDLFSYFRFLRYDPYAVYKSFYNTIKLPISRNSPNGYKKLQAILKAIMLRRTKGTLLDGKPIINLPPKTINLSKVDFSVEERSFYTKLEADSRSQFKAYYDAGTLNQNYASILLMLLRLRQACDHPQLTKGFKSNSVGKESEGAAKRLSREVRVSLLNRLESSPICRACNDPPEVPVITLCGHIFCYQCVSEYITGDENSCPVCREQLAHDAVFSQSTLRSCMAAETGCSSSSLAKGLNKAAFQNFDYSSSKIKTVLDILQSLSNQGSQNSTRNGGMPSSSQPYDVDDDDDVTIIEEQTSVPSNPHNQEPVKTIIFSQWTSMLDVLELSLNERTIEFRRLDGTMSLAARDRAIKEFSNDPDVKVMIMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITITNTVEDRILALQEEKRAMVASAFGEEYGGSSATRLTVDDLKYLFMA